Category Archives: Sao Tome

The Race: GG VII—We Reunite and Part Again

After two hectic weeks of education activities on São Tomé, Rayna Bell (Cornell University) arrived and the four of us joined the botanists, Tom Daniel, Jim Shevock, Miko Nadel, Tamas Szuts (our spider guy) and Andrew Stanbridge (our photographer) on Príncipe.   I  have asked Andrew, a veteran of three Gulf of Guinea expeditions, to illustrate some of what transpired while the group was divided.

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Our botany team, day one on Principe: Jim Shevock, Tom Daniel and Miko Nadel.

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Botany team en route to climb the mesa. Back left in the yellow hat is our guide Baloo.

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Jim on the “trail” to the mesa.

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Male Leptopelis palmatus found on the trail to the mesa. The females are the largest tree frogs in Africa.

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Tom discovers Principina, a unique sedge.

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Miko on top of the mesa

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Jim and Tom collecting specimens along the route to Roça Sundy.

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First Academy visit to the offshore island “Jockey’s Bonnet”.

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Bonnet seedeater, unique to the small island of “Jockey’s Bonnet”.

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Tom carrying specimens upriver.

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Tamas and “Bobby” Bronkhurst pooting spiders on Jockey’s Bonnet.   Here is the parting shot.

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  All images by Andrew Stanbridge PARTNERS: We are most grateful to Arlindo de Ceita Carvalho, Director General, Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for their continuing authorization to collect and export specimens for study, and to Ned Seligman, Roberta dos Santos and Quintino Quade of STePUP of Sao Tomehttp://www.stepup.st/, our “home away from home”. We gratefully acknowledge the support of the G. Lindsay Field Research Fund, Hagey Research Venture Fund of the California Academy of Sciences for largely funding our initial two expeditions (GG I, II). The Société de Conservation et Développement (SCD) and Africa’s Eden provided logistics, ground transportation and lodging (GG III-V), and special thanks for the generosity of private individuals who made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include Bom Bom Island and the Omali Lodge for logistics and lodging, The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abel, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. John Sears, John S. Livermore and Elton Welke. GG VII has been funded by a very generous grant from The William K. Bowes Jr. Foundation, and substantial donations from Mrs. W.H.V.“D.A.” Brooke, Thomas B. Livermore, Rod C. M. Hall, Timothy M. Muller, Prof. and Mrs. Evan C. Evans, Mr. and Mrs. John L. Sullivan Jr., Clarence G. Donahue, Mr. and Mrs. John Sears, and a heartening number of “Coolies”, “Blackhawk Gang” returnees and members of the Academy Docent Council. Once again we are deeply grateful for the continued support of the Omali Lodge (São Tomé) and Bom Bom Island (Príncipe) for both logistics and lodging and especially for sponsoring part our education efforts for GG VII. Our expeditions can be supported by tax-deductable donations to “California Academy of Sciences Gulf of Guinea Fund”

The Race: GG VII – – First Week: Snakes, Workshops and Spiders

Our first week is now complete. The botanists and Andrew our photographer went to Príncipe early so I will include their progress in a later blog. One thing I will add though is a picture Andrew emailed us yesterday, a shot of the endemic diurnal green snake, the Príncipe Soá-soá. We have only been able to collect one of these (GG I); it is an extremely elusive species.

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Hapsidophrys principis  A. Stanbridge phot. GG VII

Signe Mikulane, a PhD student at the University of Heidelberg had been in contact with me during the past few months and delayed her return to Germany to be with us for a week. She joined us in our early school visits, and especially our annual check of the status of the large tree where we find the Sao Tome giant treefrog.

 GGVII Photos  - 681 V. Schnoll phot. GG VII

 We found no adults but Signe dug her hand into the tree hole and came up with tadpoles, so we know the tree is still in use. In the picture above, there are several tadpoles in her hands.

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  Velma Schnoll &Signe Mikulane return from the frog tree

RCD phot. GG VII

With the arrival of Roberta Ayres (and Dr. Szuts) the biodiversity education team was complete.

P1010209Ayres and Szuts arrive in Sao Tome RCD phot. GG VII

Saturday we held our first ever teacher workshop at Escola Primaria Maria de Jesus, the largest primary school in the country (2,000+ kids).

IMG_2293RCD phot GG VII

 We spoke to 58 teachers about island biodiversity in more depth so that they can use the materials we have brought more efficiently. The hour and a half presentation was extremely well received, even though we had to project our powerpoint on the back of a canvas painting!

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RCD phot GG VII

Although we are concentrating on fourth grade this year, the teachers were from all grades and we have already noticed that our materials, the posters, the coloring books, etc. are used widely at many different levels.

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The education team: Velma Schnoll, Roberta Ayres, Roberta dos Santos

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Dr. Tamas Szuts, Professor of Biology at the University of West Hungary is our jumping spider expert. We took him into the field early, to the south end of the island and he began collecting.

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Here, Tamas is using a simple sweep net. RCD phot GG VII

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Tamas is using a beating pan here. He holds it beneath a bush and beats the latter.  RCD phot GG VII

 By the way, these pictures do not do Tamas justice. He is about 6’ 8” tall. He brings specimens back live and then photographs them in great detail.

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 This is Tamas photo setup in our room and the results are truly spectacular RCD phot GG VII

By the way, the bottle on the right is NOT vodka; it is lab grade ethyl alcohol for the preservation of DNA,

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T. Szuts photos GG VII

The second two images are salticid, or jumping spiders; the first is of a different group.

In this YouTube video, Tamas Szuts describes his fieldwork: http://youtu.be/LDdFMn0eARw

More soon when Rayna, our frog student arrives and we reunite with the rest of the science team.

Here’s the parting shot:

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Satocao workers returning from cacao plantation V. Schnoll phot GG VII

PARTNERS:

We are most grateful to Arlindo de Ceita Carvalho, Director General, Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for their continuing authorization to collect and export specimens for study, and to Ned Seligman, Roberta dos Santos and Quintino Quade of STePUP of Sao Tome http://www.stepup.st/, our “home away from home”. We gratefully acknowledge the support of the G. Lindsay Field Research Fund, Hagey Research Venture Fund of the California Academy of Sciences for largely funding our initial two expeditions (GG I, II). The Société de Conservation et Développement (SCD) and Africa’s Eden provided logistics, ground transportation and lodging (GG III-V), and special thanks for the generosity of private individuals who made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include Bom Bom Island and the Omali Lodge for logistics and lodging, The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abel, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. John Sears, John S. Livermore and Elton Welke. GG VII has been funded by a very generous grant from The William K. Bowes Jr. Foundation, and substantial donations from Mrs. W.H.V.“D.A.” Brooke, Thomas B. Livermore, Rod C. M. Hall, Timothy M. Muller, Prof. and Mrs. Evan C. Evans, Mr. and Mrs. John L. Sullivan Jr., Clarence G. Donahue, Mr. and Mrs. John Sears, and a heartening number of “Coolies”, “Blackhawk Gang” returnees and members of the Academy Docent Council. Once again we are deeply grateful for the continued support of the Omali Lodge (São Tomé) and Bom Bom Island (Príncipe) for both logistics and lodging and especially for sponsoring part our education efforts for GG VII.

Our expeditions can be supported by tax-deductable donations to “California Academy of Sciences Gulf of Guinea Fund”

The Race: “Raising Awareness”- Gulf of Guinea Expedition VII (II. The Educators)

Our first contingent of six participants is leaving for São Tomé and Príncipe in about a week, with three additional joining us a week or two later.  As preparations continue, I want to reiterate the educational part of our on-going mission.  Readers will already know that big changes are coming to these two ancient and fascinating islands, mostly due to the discovery of oil within their Exclusive Economic Zone.  At the same time, the inhabitants of the island, a little less than 200,000 in number, are largely unaware of how biologically unique their islands are (as is much of the world, hence this blog and our 20+ scientific publications).  During GG IV, 2010, we assessed the level of biodiversity training in the local schools and decided to embark on a biodiversity education campaign.
Obviously, our small group cannot do this alone, nor should we, and so in describing our efforts so far, I must include some of the amazing citizens who have been and remain essential to our success.
Three of our most important local educators (and close friends) are Roberta dos Santos, Quintino Cabral Quade and Ned Seligman.

Ned Seligman (left), native San Franciscan, Founder and Director of STeP UP,  São Tomé  (D Lin phot.  GGI

I have known Ned since childhood in San Francisco, and it was at his urging that I first visited the islands in 2000.  He introduced me to Roberta and Quintino both of whom worked for his NGO at the time. Quintino took us all over the island and I was hooked.

Ned has had more than 25 years experience working with grassroots development organizations in Africa and was the Peace Corps Director in São Tomé and Príncipe for 3 years in the mid 1990’s. Before setting up STeP UP, a local development NGO on São Tomé, he worked for the World Wildlife Fund, World Learning, Catholic Relief Services, the American Friends Service Committee and the PeaceCorps. He received his B.A. from Yale University and a Masters Degree from Johns Hopkins University Ned is the founder and Director of STeP UP with which our educational work is closely associated. Ned’s house on Praia Francesa is our unofficial “home away from home.” His lunch salads are legendary!
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Roberta dos Santos (left) and me at primary school in São Tomé.  A. Stanbridge phot. GGVI

Roberta dos Santos is a member of a very old São Tomé family.  As a young girl, she was selected as a member of a group of São Tomeans to travel to the US to learn to teach English as a foreign language.  Roberta has worked with community-based organizations in São Tomé since 1990, when she started working for the Peace Corps as Assistant Director. Prior to the Peace Corps, she taught English for twenty years in São Tomé’s only high school and later at the Diocesan Institute Joao Paulo II. She received advanced training in TEFL for three years in Buffalo, NY. Having been born and raised on the hot tropical island of São Tomé, Roberta’s description of landing for the first time in Buffalo, New York in February, the dead of winter, is truly hysterical.  She is well known in the educational community, has helped us plan our school visits and vetted our educational materials.  She and Quintino usually join our school visits as translators.

 

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Roberta Ayres (left, CAS Science Educator) and Roberta dos Santos planning GG V poster campaign (RCD phot GG IV)

Quintino Quade graduated from the Teacher Training Institute “Tchico Te” in 1993 and was a teacher, first in a middle school and later in a high school in Bissau, the capital of Guinea-Bissau. During the war in that country, he emigrated to São Tomé and has been working with STeP UP since 1999.

 

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(l to r) Quintino Quade, Velma Schnoll, Bioeducation coordinator, me, Roberta Ayers, Science educator, during coloring book campaign of GG VI.  A. Stanbridge phot. GG VI

Quintino has been teaching English at the SAPEL school for many years, but he has also accompanied us and been actively involved in all of our scientific expeditions since the very beginning.

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Quintino Quade  with his  first snake capture (dead)  RCD phot GGI

During GG V, we were most fortunate to meet Jorge Bom Jesus, Director of the Teacher Training institute and currently Minister of Education and Culture. Together we discussed the possibility of future Biodiversity training workshops for teachers at the Institute.

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Discussing teacher biodiversity training with Jorge Bom Jesus (center), current Minister of Ed. Education

One of our strongest supporters and wisest counselors is Henrique Pinto da Costa.  Henrique is a former Minister of Agriculture and has always been interested in youth development; we discuss most of our education ideas with him.  He is the brother of the current President of the Republic, Manuel Pinto da Costa. We actually captured an endemic spider in his garden (see Sept 2, 2011 blog).

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Henrique Pinto da Costa, examining biodiversity poster in 2011.  A. Stanbridge phot.-GGV

 

During GG V, the poster year, we met Francisca de Ceita, Principal of the largest primary school on São Tomé  (2500 students). She welcomed us to her school during GG VI, where we distributed 534 coloring books to 16 classes of third grade students.

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Francisca de Ceita, Principal of São Tomé’s largest primary school.  A. Stanbridge phot. GG V.

Our biodiversity  education and scientific activities have always received tjeenthusiastic support of the Regional Present of Príncipe, Jose Cassandra.  We meet with him each year and inform him of our activities.

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Discussing the coloring book campaign with Regional President of Príncipe Jose Cassandra (center) and Secretary of Infrastructure Nestor Umbellina  (right). A. Stanbridge phot. GG VI.

During GG VI, we met the Director of Education and Health for Principe, Natalia Umbellina, and she helped us coordinate  our visits to the schools of that island.

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Natalia Umbellina Director of  Education and Health of Príncipe (far left – Madalena Patacho of Bom Bom Island) . A. Stanbridge phot. GG VI

Our educational aids for GG VII are sets of Biodiversity Activity Cards.  The cards were conceived and designed by the same great group of volunteers that produced the coloring books of GG VI (see “Sharing the Wealth” – March 2012), and we are most grateful to the Omali Lodge and Bom Bom Island for help funding the project

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The Biodiversity Activity cards, our educational tools for GG VII

During GG VI, we visited 40schools, 67 classrooms and distributed 1823 coloring books to third graders.  In GG VII, beginning in April, our education team intends to visit the same classes in the same schools on both islands, only now the children will be fourth graders. Our educators, Velma Schnoll and Roberta Ayers have developed a series of games for the students to play at the same time increasing their awareness of the unique fauna and flora of both islands.

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Velma Schnoll, Bioeducation Coordinator (above) showing the cards to third graders at McKinley Elementary School in San Francisco. She is in the process of setting up a letter exchange between these students and the students of Porto Real, my adopted school on Principe.

Why kids, you ask?  I call it the “Ray Kroc model”.. For those of you who remember, Ray Kroc did not create McDonalds, the world’s most successful food chain, by advertising to adults–he advertised to the kids!

Here’s the parting shot:

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Angus Gascoigne at Roça Abade, Príncipe.  phot Carlos Pinheiro.

Angus Gascoigne  died just last year; he was the foremost resident naturalist on the islands and an enormous help to both our scientists and investigators from around the world.

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PARTNERS
We are most grateful to Arlindo de Ceita Carvalho, Director General, Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for their continuing authorization to collect and export specimens for study, and to Ned Seligman, Roberta dos Santos and Quintino Quade of STePUP of Sao Tome http://www.stepup.st/, our “home away from home”.
We gratefully acknowledge the support of the G. Lindsay Field Research Fund, Hagey Research Venture Fund of the California Academy of Sciences for largely funding our initial two expeditions (GG I, II). The Société de Conservation et Développement (SCD) and Africa’s Eden provided logistics, ground transportation and lodging (GG III-V), and special thanks for the generosity of private individuals who made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include Bom Bom Island and the Omali Lodge for logistics and lodging, The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abel, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. John Sears, John S. Livermore and Elton Welke. GG VII has been funded by a very generous grant from The William K. Bowes Jr. Foundation, and substantial donations from Mrs. W.H.V.“D.A.” Brooke, Thomas B. Livermore, Rod C. M. Hall, Timothy M. Muller, Prof. and Mrs. Evan C. Evans, Mr. and Mrs. John L. Sullivan Jr., Clarence G. Donahue, Mr. and Mrs. John Sears, and a heartening number of “Coolies”, “Blackhawk Gang” returnees and members of the Academy Docent Council. Once again we are deeply grateful for the continued support of the Omali Lodge (São Tomé) and Bom Bom Island (Príncipe) for both logistics and lodging and especially for sponsoring part our education efforts for GG VII.

Our expeditions can be supported by tax-deductable donations to “California Academy of Sciences Gulf of Guinea Fund”

The Race: Two More New Species for São Tomé and Príncipe

Just as I was preparing to write more on the up-coming GG VII,  I received some great news. Long-time readers will recall that Gulf of Guinea III (B) in 2008 was a marine expedition that included a graduate student named Dana-Carrison Stone (see “Send in the Marines” and several subsequent blogs). Dana completed her MSC thesis a year or so ago, and has just published part of her dissertation that includes the description of two new species of barnacles. The publication is in ZooKeys 270.

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Dana Carrison- Stone, off Príncipe Id with two boatmen and Dr. John McCosker, a specialist on marine eels here at CAS. Phot. B. Van Syoc – GG III
Dana’s barnacles grow on octocoral, also known as sea fans or gorgonians.  Some of the barnacles grow on a number of different host sea fans, but some are very host specific.

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Dana off São Tomé examining a gorgonian for barnacles. Phot. M. P. Perez- GG III

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Conopea saotomensis new species; Some of the gorgonian tissue has been cut away so that the shell of the new species can be readily seen. [D Carrison phot]

Dana discovered that the new C. saotomensis grows on at least 13 different species of sea fans, such as Eunicella, pictured below.

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Red and yellow gorgonian,  Eunicella, [ G Williams phot GG III]

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Conopea fidelis new species. [D. Carrison phot.)

However, the other new species, C. fidelis, is found only on a single species of gorgonian, Muriceopsis tuberculata see below, hence her choice of the species name, “faithful.”

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[G. Williams phot. CAS]
Ex São Tomé et Príncipe semper aliquid novi!
The Parting shot:

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Wash day at Generosa, Sao Tome.  B. Simison phot – GG VI.

PARTNERS
We are most grateful to Arlindo de Ceita Carvalho, Director General, Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for their continuing authorization to collect and export specimens for study, and to Ned Seligman, Roberta dos Santos and Quintino Quade of STePUP of Sao Tome http://www.stepup.st/, our “home away from home”.
We gratefully acknowledge the support of the G. Lindsay Field Research Fund, Hagey Research Venture Fund of the California Academy of Sciences for largely funding our initial two expeditions (GG I, II). The Société de Conservation et Développement (SCD) and Africa’s Eden provided logistics, ground transportation and lodging (GG III-V), and special thanks for the generosity of private individuals who made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include Bom Bom Island and the Omali Lodge for logistics and lodging, The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abel, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. John Sears, John S. Livermore and Elton Welke. GG VII has been funded by a very generous grant from The William K. Bowes Jr. Foundation, and substantial donations from Mrs. W.H.V.“D.A.” Brooke, Thomas B. Livermore, Rod C. M. Hall, Timothy M. Muller, Prof. and Mrs. Evan C. Evans, Mr. and Mrs. John L. Sullivan Jr., Clarence G. Donahue, Mr. and Mrs. John Sears, and a heartening number of “Coolies”, “Blackhawk Gang” returnees and members of the Academy Docent Council. Once again we are deeply grateful for the continued support of the Omali Lodge (São Tomé) and Bom Bom Island (Príncipe) for both logistics and lodging and especially for sponsoring part our education efforts for GG VII.
Our expeditions can be supported by tax-deductable donations to “California Academy of Sciences Gulf of Guinea Fund”.

The Race: Endemicity and the Gulf of Guinea VII Expedition (I. The Scientists)

Readers may recall that last March, prior to GG VI, I gave several lectures in Portugal on Gulf of Guinea island biodiversity. The last was an international colloquium on São Tomé and Príncipe held at the University in Lisbon. There I met a number of the participants, among whom were old friends and a delightful entomologist named Dr. Luis Mendes; Luis and I remained in contact, and he has just published and sent me the most up-to date survey of the butterfly fauna of the islands butterfly fauna.

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Photo by Luis Mendes

As we have learned to expect, the endemicity (uniqueness) level is high. Luis and his colleague, Bivar de Sousa, report 111 species present on both islands, 29 of which are found nowhere else in the world. Thus, fully a quarter of the butterflies (26%) are endemics. This is further testimony to the great age of these islands, as we know that genetic change (evolution) occurs with isolation and time. Last month, another paper appeared by Loureiro and Pontes confirming the endemic status of a species of dragonfly, Trithemis nigra found only on Príncipe but not seen for many years.

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Photo of Trithemis nigra byNuno Loureiro 

The image below is a summation of our current knowledge of  some of the insect endemicity on the two islands; much of the data upon which this summation is based are very old, and so much more work needs to be done.

INSECTS

photo: www images:  CAS construct.

We are getting ready for GG VII (April-May), and below is our new logo for the expedition; note that the famous Cobra bobo, a legless amphibian found only on São Tomé has been joined by an endemic Príncipe snake, also called Cobra bobo but entirely unrelated. (The cartoons of both animals were made by my graduate student, Dashiell Harwood, and the layout was by a member of our Biodiversity Education Team, Michael Murakami.

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GG VII (2013) logo.

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James Shevock of CAS; photo A. Stanbridge- GG VI

Jim Shevock, a world-class bryologist, will be joining us for the third time. As you can see from the data above, he has already greatly increased our knowledge of mosses and their relatives on the islands, and there are still many species to be found. For example, during GG VI last year, Jim returned to the same locality along the Rio Papagaio in Príncipe that he had collected during GG V; in GG VI and found many plants he did not find the first time, including 10 of them new to the country! Jim has worked a lot in Asia and his nickname on Taiwan is “Little Bear.”

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Rayna Bell at Caxuiera, Sao Tome. A.  Stanbridge phot – GG VI

Rayna Bell is a graduate student from Cornell University. During GG VI she studied possible hybridization between the two endemic São Tomé treefrog species Hyperolius thomensis and H. molleri and currently has a paper in press on her work with us last year. This year we will try to find the elusive tadpole (larva) of the Príncipe giant treefrog which remains undescribed. Leptopelis palmatus is the largest treefrog in Africa.  Speaking of herpetology, to date our CAS island specimens and tissues have been used in 33 scientific publications, internationally!

Tom

Dr. Tom Daniel, Lagoa Amelia, Sao Tome.  RCD phot, GG III

Dr. Tom Daniel is a veteran of GG III and GG IV. Our senior botanist, he is a specialist on the flower family Acanthaceae (shrimp plants); in the picture above, he is standing in Lagoa Amelia next to Heteradelphia, a genus we think is endemic to São Tomé. He has done a lot of work on ferns and other Gulf of Guinea plant groups as well.

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Dr. Tamas Szuts with some of his critters – Tszuts photos

Dr. Tamas Szuts is an expert on jumping spiders of the family Salticidae. He was a post-doctoral fellow here at the Academy under Dr. Charles Griswold (GG I) and will be joining the team for the first time. He is now on the faculty of the University of West Hungary. Salticids are about the only spider  group I think are kind of cute, face to face!

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Miko Nadel, Sao Tome.  A. Stanbridge photo. GG VI

Miko Nadel is a graduate student at San Francisco State University under Prof. Dennis Desjardin (GG II, GG III). After making a comprehensive lichen collection during GG VI, he has decided to focus his research on the lichen genus Usnea; these are the hanging, pendulous lichens known in the US as “old man’s beard.”

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Andrew Stanbridge at Laguna Azul, Sao Tome.  A. Stanbridge photo. GG VI

We will once again be documented by the world’s largest photographer, Andrew Stanbridge, veteran of GG V and GG VI. Andrew was one of those who ascended the Pico do São Tomé last year (see last April blog). His obvious photographic skills are only part of what he brings to our expeditions.

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Dr. Bob Drewes with Regional President of Principe, Hon. Jose Cassandra.  A. Stanbridge phot.  GG VII

I will be leading the trip as usual and will attempt to answer the ongoing question: do I have to wear a tie to see President Jose, or do I not have to wear a tie? .. Never quite seem to get it right.

The second part of the blog will be focused on the education team and our plans for Gulf of Guinea VII

Here’s the Parting Shot:

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Incredible Principe Island. A. Stanbridge phot. GG VI

 

PARTNERS

We are most grateful to Arlindo de Ceita Carvalho, Director General, Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for their continuing authorization to collect and export specimens for study, and to Ned Seligman, Roberta dos Santos and Quintino Quade of STePUP of Sao Tome http://www.stepup.st/, our “home away from home”.

We gratefully acknowledge the support of the G. Lindsay Field Research Fund, Hagey Research Venture Fund of the California Academy of Sciences for largely funding our initial two expeditions (GG I, II). The Société de Conservation et Développement (SCD) and Africa’s Eden provided logistics, ground transportation and lodging (GG III-V), and special thanks for the generosity of private individuals who made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include Bom Bom Island and the Omali Lodge for logistics and lodging, The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abel, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. John Sears, John S. Livermore and Elton Welke. GG VII has been funded by a very generous grant from The William K. Bowes Jr. Foundation, and substantial donations from Mrs. W.H.V.“D.A.” Brooke, Thomas B. Livermore, Rod C. M. Hall, Timothy M. Muller, Prof. and Mrs. Evan C. Evans, Mr. and Mrs. John L. Sullivan Jr., Clarence G. Donahue, Mr. and Mrs. John Sears, and a heartening number of “Coolies”, “Blackhawk Gang” returnees and members of the Academy Docent Council. Once again we are deeply grateful for the continued support of the Omali Lodge (São Tomé) and Bom Bom Island (Príncipe) for both logistics and lodging and especially for sponsoring part our education efforts for GG VII.
Our expeditions can be supported by tax-deductable donations to “California Academy of Sciences Gulf of Guinea Fund”.

 

 

 

 

 

The Race: Peregrinations of a Pinniped (Our Islands get Seal of Approval)

I have recently learned from my island friend Madalena Patacho of Bom Bom Island that a Cape fur seal (Arctocephalus pusillus) was seen and photographed on a beach at the north end of Príncipe Island and was also later seen by a number of islanders along the São Tomé coast.

 

The Cape (South African) fur seal, Arctocephalus pusillus at Praia Sundy, Principe Id. December 2012. photo by Jamili

Why is this noteworthy? It is special because although vagrant individuals of this large species have occasionally been seen as far north as the southern border of Angola, the nearest breeding colony of Cape (or South African) fur seals is just under 2,700 km south of Príncipe, at Cape Cross Namibia!  This is almost exactly the same distance as between Príncipe and Kampala, Uganda.

My colleague, Bastien Loloum works for MARAPA, an NGO on the islands heavily involved in marine life and conservation. Bastien is coordinator of a cetacean  monitoring program there. So far they have recorded ten species of cetaceans but he informs me that there are no formal records of the Cape fur seal in the islands waters.  However, he and his colleagues think that this is may be the second or third account of a vagrant fur seal there during the past decade.  This would be rare indeed, but for reasons given below, I am not too surprised.

Map from  IUCN Red list.

The Cape or South African fur seal is the largest of its kind (Otariidae= fur seals + sea lions; true seals lack external ears and belong to a different family, the Phocidae); males reach 2.27m in body length and 360kg in mass. Females are much smaller. As the map shows, this species lives and breeds along the South African and Namibian coast. There are about 23 major breeding colonies, and there are population estimates of over one million individuals. In 1992,  I was fortunate to explore the Skeleton Coast of Namibia by air from Capetown to about 16º south latitude, and the Cape fur seal colonies were impressive to say the least.

Above the Namib coast;  RCD photo 1992

Above the Namib coast;  RCD photo 1992

Later and somewhat farther north, we were able to approach a colony by land as there were intervening rocks disguising our presence.

On the Namib Coast.  RCD phot. 1992

On the Namib Coast. RCD phot. 1992

Note the conspicuous external ear which is one characteristic that differentiates these mammals from true seals. RCD phot. 1992

The key to understanding how these enormous populations of large pinnipeds are sustained, and how one individual might have arrived in the Gulf of Guinea 2700 km to the north lies in understanding the nature of the Benguela Current which flows up the west coast of southern Africa. The Benguela is a cold current and is thus highly oxygenated water. This supports vast amounts of plankton which in turn provide sustenance for a huge marine fauna “higher up the chain.” In fact, the Benguela Current is one of the richest fisheries in the world.

Notice the persistent, thick, slightly discolored foam on the shore which indicates high plankton content in the water. RCD phot. 1992

A major factor important to our seal story and indeed, perhaps to the early colonization of the Gulf of Guinea islands’ unique plants and animals, is the fact that the Benguela Current flows from South to North and has undoubtedly done so since the Atlantic Ocean opened up in the Cretaceous.

Dominant currents in  the Gulf of Guinea and South Africa.  CAS construct

As the map shows, the Benguela flows north past the Congo River Delta. At the same time, the Guinea Current flows West to East across the Niger Delta. These two currents converge in the Bight of Benin to form the South Equatorial Current, and this major current flows due West, directly through the Gulf of Guinea Islands and across the Atlantic.

Hypothesized raft. artwork by Richard E. Cook. insert photos D. Lin GG I and II

Because these two major currents cross the deltas of two of the mightiest rivers in Africa each with huge interior drainages, then change direction westward through São Tomé and Príncipe suggested to us that many of the endemic plants and animals on the two islands arrived there millions of years ago by rafting.  We suggested that the raft(s) would be large chunks of riverbank which broke off and floated to the sea. Our hypothesis that the rafts would have been very large is supported by the fact that a significant percentage of the unique reptiles (and one amphibian) of both islands are burrowing species (see inset, above), unlikely to cross ocean barriers on small floating objects.  We published this hypothesis in the Journal of Biogeography in 2007.

With respect to our Cape fur seal visitor, a closer look at the first image reveals that this animal ran afoul of a fishing operation of some sort; note the blue polyethylene rope or netting around its neck which may have come from a trawling operation to the south.  While it is highly unlikely that the poor creature was dragged 2700km, it IS possible that having been entangled, and then escaping, the seal became disoriented and probably very much weakened.  It seems likely that the “line of least resistance” would be to follow the Benguela Current until it converged with the South Equatorial Current, ultimately depositing the animal in the waters off São Tomé and Príncipe. This, in a sense, would be following part of the same dispersal pathway as the original plant and animal colonizers of the islands if our rafting hypothesis is correct.  It is impossible to know for sure, but this seems to me a possible scenario.

Here’s the parting shot:

Blue-breasted kingfisher. This one hangs out above Bom Bom Island, Principe. Weckerphoto -GG III

 

PARTNERS
We gratefully acknowledge the support of the G. Lindsay Field Research Fund, Hagey Research Venture Fund of the California Academy of Sciences, (GG I, II), the Société de Conservation et Développement (SCD) and Africa’s Eden for logistics, ground transportation and lodging (GG III-V), STePUP of Sao Tome http://www.stepup.st/, Arlindo de Ceita Carvalho, Director General, and Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for permission to collect and export specimens for study. Special thanks for the generosity of private individuals who made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include HBD of Bom Bom and the Omali Lodge for logistics and lodging, The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abell, Prof. & Mrs. Evan C. Evans III, John and Judy Sears, John S. Livermore and Elton Welke.
Our expeditions can be supported by tax-deductable donations to “California Academy of Sciences Gulf of Guinea Fund”.

 

 

 

 

 

 

The Race: Flatworms, a New Doctor and an Island Education Video

One of our most consistent and knowledgeable colleagues on the island of São Tomé has been Ricardo Lima, up until recently a graduate student at the University of Lancaster.

ricardo-lima-crossing-rio-lemba1

Ricardo Lima crossing the Rio Lemba, Sao Tome. (unknown phot)

Ricardo has been studying the effects of land use changes on the distribution of the endemic birds of São Tomé, and I am delighted that (1) he has just completed his PhD, (2) he has published a fine article on his research in the journal Diversity and Distribution, and (3) he is back on the big island having found funding for the continuation his research. This funding will also allow the reprinting of the biodiversity posters we distributed during GG V in 2011.Readers will recall we were able produce only 200 of these (see March – April 2011 posts).

ricardo-good

Dr. Ricardo Faustino de Lima being savaged by a Sao Tome malachite kingfisher (unknown phot)

Over the several years I have known him, Ricardo has sent us images and/or specimens of great interest to us both, including a freshwater fish we missed in our 2001 and 2006 river surveys (we still have not analyzed one), and especially the specimens of the endemic shrew, Crocidura thomensis which we subsequently studied genetically.Dr. Lima will be one of the authors when the shrew paper is completed.A year or so ago, Ricardo sent us some pictures of a strange, brightly colored flatworm called a terrestrial planarian or geoplanid.

plan-in-hand

Terrestrial planarian (geoplanid) (R. Lima phot.]

As delicate as these little terrestrial creatures appear, they are actually voracious predators upon snails, slugs, insects and earthworms.The known species have very narrow, specific habitat preferences and thus can be used as indicators of habitat types. Readers will recall that over 60% of the snails of São Tomé and Príncipe are found nowhere else in the world, including an endemic genus, Bocageia; if this geoplanid is an invasive, it may well be a real threat to the populations of endemic snails.

good-plan

Terrestrial planarian (geoplanid) (R. Rocha phot.)

Even with a better image in hand (above) we could not put a name on this animal. We have many experts here at CAS, but none specializes in this class of invertebrates, the Platyhelminthes.During GG VI last April, Miko Nadel, our lichenologist graduate student collected a specimen way up at 1700 meters on Pico do São Tomé (see Mountains that Glow, April 2012) and brought it back.

miko-and-jim-as

Miko Nadel (l) and Jim Shevock on Sao Tome [A. Stanbridge phot. GG VI]

Now with a specimen in hand, we needed to find an expert.Thanks to Dr. Shannon Bennett, Head of our Department of Microbiologist, we discovered Dr. Ronald Sluys, of the Netherlands Centre for Biodiversity Naturalis. Dr. Sluys has been sent the specimen and is “willing to give it a try!”.Apparently, there are not all that many experts in this field, and Ron says he will have to section our one specimen with a microtome in order to try to identify it.If it is new, we will try to get more for him; if it has a name, we can add yet another species to the remarkable biota of the islands.

Finally, our readers will know that since GG IV in 2010 we have been developing a biodiversity education program for the youth on both islands.Our volunteer group has put together a video describing the bio-ed project; this will be the first time I have tried to post a video on this blog.It is about 7 minutes long, and if it works, my thanks to Jim Boyer for his expertise.

Please click on this link:

http://youtu.be/CdI9z8buqJ8

Here’s the parting shot:

picos-joao-dias-pai-e-filho-5-principe-tdan

Picos Joao Dias Pai e Filho (father and son), Principe [T. Daniel phot. GG IV)

PARTNERS
We gratefully acknowledge the support of the G. Lindsay Field Research Fund, Hagey Research Venture Fund of the California Academy of Sciences, (GG I, II), the Société de Conservation et Développement (SCD) and Africa’s Eden for logistics, ground transportation and lodging (GG III-V), STePUP of Sao Tome http://www.stepup.st/, Arlindo de Ceita Carvalho, Director General, and Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for permission to collect and export specimens for study. Special thanks for the generosity of private individuals who made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include HBD of Bom Bom and the Omali Lodge for logistics and lodging, The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abell, Prof. & Mrs. Evan C. Evans III, John and Judy Sears, John S. Livermore and Elton Welke.
Our expeditions can be supported by tax-deductable donations to “California Academy of Sciences Gulf of Guinea Fund”.

The Race: Island Biologists in Training

Jens Vindum, Senior Collections Manager, Department of Herpetology. (phot D. Lin-GG I)

I need to add and addendum to last month’s blog, “Why We collect Specimens.” Our Senior Collections Manager, Jens Vindum (GG I, GG II) has just informed me that since 2003, there have been 33 international scientific papers published on our Gulf of Guinea reptile and amphibian specimens and/or tissue samples from them!

Clearly, the scientific world is beginning to hear about Sâo Tomé and Príncipe! At this point, I do not know how much of our material from other disciplines has been used but certainly our samples are in labs all over the world.

We have been extremely fortunate to have been able to bring a series of our graduate students with us on a number of our expeditions.  Not only have most flourished academically and many have published on their island projects, they represent a cadre of new young scientists who have an understanding of the uniqueness of the islands and the people who live on them.  All have interacted closely with local island citizens and as a result, function as young biology ambassadors for these fabulous islands.  Overall, the islands are still very poorly known to the outside world, but we are getting there!  Here are our young colleagues:


Lindsay Wilson on Bioko Island with bush viper.  RCD phot – 1998

Lindsay Wilson was a participant on our 1998 expedition to Bioko, the first island in the Gulf of Guinea chain. She completed her MSc on African treefrogs of the genus Hyperolius at San Francisco State University with highest honors.


Joel Ledford on Sao Tome.  D. Lin phot- GG I

Joel Ledford joined Gulf of Guinea I as the graduate student of Dr. Charles Griswold. He completed his MSc at San Francisco State and then his PhD in spider systematics at the University of California, Berkeley.


D. Lin phot – GG I

Also on GG I was Ricka Stoelting, my graduate student. She completed her MSC on the endemic caecilian of Sao Tome (she is holding one, above) and is currently a PhD candidate at the University of Wisconsin.  She is also working on the publication of her MSc work at San Francisco State (SFSU).


B. Van Syoc photo – GG III

Dana Carrison-Stone was a participant of the marine expedition, GG III as the graduate student of Dr. Bob Van Syoc.  Dana discovered two new species of barnacles from the islands and they are part of her MSc which she completed last year at SFSU.


D. Lin phot – GG II

Josef Uyeda was on GG II and again GG on III as an undergraduate at Willamette University and one of my Summer Systematics interns.  During his island work, he discovered and described a new species of frog from Sâo Tomé. As I write, he is defending his doctoral thesis (tomorrow!) at Oregon State University. Flash!! Josef finished his PhD today! (Oct 5)

 

                                                                                                             unknown phot.

Mac Campbell, also a Willamette undergrad, joined GG II as an assistant to our ichthyologist, Dr. Tomio Iwamoto.  He has since completed his MSc at University of Alaska, Fairbanks and is currently a PhD candidate in fish systematic at the same institution.


Weckerphoto – GG III

Rebecca Wenk joined GG III as the grad student of Dr. Tom Daniel one of our senior botanists.  Rebecca’s work resulted in her successful completion of her MSc at SFSU and also an excellent scientific publication on plants of the family Acanthaceae.  Tragically, Rebecca died of a serious illness last year.


A. Stanbridge phot – GG IV

Miko Nadel is a graduate student at San Francisco State, studying under Dr. Dennis Desjardin, the mycologist on GG II and GG III). Miko was a participant on GG VI doing the first comprehensive survey of lichens on the island.

A. Stanbridge phot. GG VI

Rayna Bell also joined us on GG VI, studying color variation in African treefrogs. Rayna is a PhD candidate at Cornell University.

The people above were or still are graduate students who have actually worked on the islands with us.  But they are not the only young academics studying our Gulf of Guinea Island material.  Here at the California Academy of Sciences we have a program known as the Summer Systematics Institute (SSI). This program is funded by the National Science Foundation, and undergraduate students can apply to work on scientific projects for the summer under the mentorship of a CAS faculty member. Here are those that have worked on Gulf of Guinea specimens. I have not included students who started as undergrad SSI interns and later became our grad students (Lindsay Wilson, Josef Uyeda and Ricka Stoelting).


unknown phot

Katie Marshall was an Occidental College undergrad and my SSI intern in 2006.  Katie studied the genetics of the Oceanic treefrog, Hyperolius molleri, the only Gulf of Guinea endemic frog that occurs on both islands.  Katie is currently a PhD candidate at the University of Washington, studying the genomics of marine bacteria.

RCD phot.

Lisette Arellano was an undergrad at the University of California, Santa Barbara when she joined us as my SSI intern in 2009. Lisette examined the morphology and genetics of cobra jita snakes (Lamprophis), long thought to be the same species on Sâo Tomé and Príncipe.  Lisette showed that in fact the two island populations are genetically quite different, also recognizable by color pattern as distinct.  Although we know each island is a different species, we have been unable to publish new names because the relationships of the same group on mainland Africa are still very unclear. Lisette is currently a PhD candidate in Biology at the University of Colorado.


RCD phot – 2010

One of the last vertebrates one would predict to be native to an oceanic island is a shrew, largely due to physiological constraints. During the SSI summer of 2010, Eden Maloney’s DNA work showed that the Sâo Tomé shrew, Crocidura thomensis, did arrive on the island naturally, probably many thousands of years ago and is a true endemic species. Its nearest relative is a different species found in eastern South Africa.  Eden has just graduated from the University of California, Los Angeles and is applying to graduate schools.  We are working on publishing her work.

unkown phot.

Lizzie Miller of the University of California, San Diego was my most recent SSI intern (2010). Lizzie has graduated and is now in graduate school at UCSD studying fish systematics.  Readers will already know from this blog that Lizzie discovered and described a new species of gecko from Príncipe, Hemidactylus principensis.

Lauren in Nigeria. D Blackburn phot – 2012.

Lauren Scheinberg is also a grad student at San Francisco State University. Although never an SSI intern nor has she been with us to the islands, she was my lab assistant on a long-term physiology project and now works as a curatorial assistant in our department.  She has become involved in a rather complicated taxonomic problem with the island skinks of the genus Afroablepharis. Like Lisette’s snakes, we know from the work of colleagues in Madeira and Portugal that the skinks are different species on Sâo Tomé and Príncipe.  Unfortunately, material we loaned them that formed part of the basis of this hypothesis was somehow lost in transit.  Lauren has analyzed our remaining material but collating the information generated by different labs can be extremely difficult.  But we are working on it.

Plans are already afoot for GG VII next year.

Here’s the parting shot:

Joy on the way to Rolas, Sao Tome.. B. Simison phot. – GG VI

PARTNERS
We gratefully acknowledge the support of the G. Lindsay Field Research Fund, Hagey Research Venture Fund of the California Academy of Sciences, (GG I, II), the Société de Conservation et Développement (SCD) and Africa’s Eden for logistics, ground transportation and lodging (GG III-V), STePUP of Sao Tome http://www.stepup.st/, Arlindo de Ceita Carvalho, Director General, and Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for permission to collect and export specimens for study. Special thanks for the generosity of private individuals who made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include HBD of Bom Bom and the Omali Lodge for logistics and lodging, The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abell, Prof. & Mrs. Evan C. Evans III, John and Judy Sears, John S. Livermore and Elton Welke.
Our expeditions can be supported by tax-deductable donations to  “California Academy of Sciences Gulf of Guinea Fund”

The Race: Why We Collect Specimens!

Summer has been extremely busy.   Our irrepressible bryologist, Jim Shevock, comes into my lab almost weekly with new moss discoveries from GG VI.  He says a new paper on Fissidens (the largest moss genus on Sâo Tomé and Príncipe) is almost finished and will be submitted for publication as soon as he and his colleagues (from the US, the Netherlands and Lisbon) complete a key to identification of the species. Recall that Jim nearly doubled the number of collections he made during GG IV… He thought he had seen everything! The mesa on Príncipe will be a primary target for our botanists on GG VII, next year (see below).

 

Phrynobatrachus leveleve – RCD phot, GG VI

A nice surprise from GG VI was that we finally got some nice, un-posed  photographs of the Sâo Tomé puddle frog, Phrynobatrachus leveleve. Readers may recall that we described this new endemic species back in 2007 following GG II (leve leve means “take it easy” in the local language).  Obviously the way to get good shots of these critters is at night!

Ptychadena newtoni.  A. Stanbridge phot – GG VI

Another good find on a different night was Newton’s rocket frog (Ptychadena newtoni) at a new locality, Caxueira.

The creek at Caxueira.    A. Stanbridge phot. – GG VI

In earlier days I was concerned that this species, endemic to Sâo Tomé, was on the wane due to human development, but it appears to be more widely distributed than we thought (see also Feb 2011 blog). Caxueira is not far from the city center.

Why do we collect plant and animal specimens? Why do we bring them home euthanized and preserved (or in the case of plants, pressed and dried), and why do we organize and store them for posterity?  The easy answer is that we need to find out what they are, to identify them and describe them so we can communicate about them.  We certainly cannot conserve or preserve or even talk about species if we do not know they exist. This is particularly important in the tropics where so many different species have evolved, and especially in areas like Sâo Tomé and Príncipe that have never been fully explored by biologists.  An added note is that for a biologist to know that a species is new and undescribed, he has to know all the related species that it isn’t and then demonstrate it!

It is a fact that a lot of things in the tropics that look alike are not at all related; conversely, some critters that look radically different are, in fact, just variants of the same species.

The botanists of course confront similar questions. Below are two species of the genus Impatiens.

(l) T. Daniel phot – GG IV; (r) M. Nadel phot – GG VI

Both species are high elevation forms described a long time ago: I. manteroana is thought to be endemic to Príncipe, while I. thomensis is known only from Sâo Tomé. But are they really different species? And if so, are they each other’s closest relatives?  We do not yet have material of the former, but this is a question we can answer next year through DNA analysis. The specimen on the right was photographed high on the Príncipe mesa, which is one of the reasons it is a target area for next year.

Below is an island example of two species that look very much alike but are definitely not the same:

D. Lin phots: GG I, GG II]

These are photographs of small leaf-litter skinks of the genus Afroablepharus. The specimen above was collected on Sâo Tomé during GG I and the one below came from Príncipe (GG II).  While they look identical, they are actually two different species as shown by colleagues of ours who were working on the molecular level: extracting DNA from small bits of tissue (probably tail tips) the two species were shown to be genetically quite different.  The one from Príncipe was described over 160 years ago (A. africanus), while the one above, from Sâo Tomé, remains unnamed. This is most frustrating as even though we know they are separate species, we cannot describe the new species yet because the Sâo Tomé animals from which the DNA was analyzed were not collected.  It is a complicated situation that both groups of workers together are trying to resolve at this time.

Another example can be found in the island geckos about which I have written before.

From public presentation by E Miller. CAS Big Kahuna phot (same specimens from above and below).

For over one hundred years, the geckos from both islands that lack thumb nails were considered to be the same species, Hemidactylus greeffi, originally described from Sao Tome.  Our same colleagues noted that the two were genetically different but again failed to take whole samples and so could not describe the Príncipe species as new.  It was not until we closely examined specimens in our Academy collections from both islands that we found many morphological differences between the two, which strongly supported the genetic evidence of our colleagues.  The animal on the right is now  known as Hemidactylus principensis, yet another island endemic. As luck would have it, the paper was published while we were on Principe!

The smaller specimen on the right in both views is also what is known as the holotype; i.e., it is the single animal that is described in minute detail that becomes the “name bearer”.  All geckos collected from the islands and identified as H. principensis will be based on the description of this particular specimen; holotypes are the most important specimens in any collection.

In our collection, which is probably the fifth largest in the world, all holotypes are housed separately and identified by a blue ribbon.

Part of Herpetology collections rooms; holotypes above right, paratypes below right. RCD phots.

Another question often asked of museum scientists is “why do you have to collect so many?”  The answer is that species vary; no two members of the same vertebrate species are identical.  This is why we include additional specimens in a species description.  While the holotype or “name bearer” is usually a single animal in a standard description, other members of the same purported species, hopefully from the same place, are also described in some detail in order to account for individual variation.  These are usually designated as paratypes; in the Academy collections, they are always designated by red ribbons [above] and are the second-most important.

Yet another frequently asked question is, “do you have to kill the specimens?”  The answer lies in the fact that not all characters (similarities and differences) are observable from the outside.  With animal groups like frogs, one has to look deeper, and this is impossible with living specimens. Below is a collage of some of the sorts of characters I had to examine in determining the relationships between members of African tree frogs of the family Hyperoliidae— found in Africa, the Seychelles and Madagascar.

All RCD phots.

Notice that the x-ray in the lower right hand corner revealed to us that the two geckos mentioned above not only lack thumb nails, they lack the entire terminal bone of the thumb! (the new species, Hemidactylus principensis, is on the left). So far as we know, they are the only two members of the genus Hemidactylus, (90+ species) that exhibit this characteristic.  This might suggest they are each other’s closest relatives, but we are in the process of determining that by further DNA analysis that includes other closely related species.

During GG VI we did another kind of collecting:

Rayna Bell, Cornell University. A. Stanbridge phot – GG VI

Notice that in her left hand, Rayna Bell is holding an adult Sao Tome giant treefrog (Hyperolius thomensis), while in her right she has a cotton swab.  She swabbed the skin of each frog she collected a number of times in a number of places in order to detect the presence of chytrid fungus. The swab will also detect the actual infection load if the fungus is present.  This is the first attempt at detecting the fungus on the islands of Sâo Tomé and Príncipe, and we do not yet have results. It is certainly present in other areas of Africa. Batrachochytridium dendrobatidis (Bd for short) is a fungus that has been implicated in the mass die-off of populations of frogs in many parts of the world.  Frog skin is a living membrane through which gasses and water can freely pass; while the mechanism is not well-known, the fungus seems to totally disrupt these functions causing the demise of the infected frog.

 

Cross section of Bd infected frog skin.  (A) are sporangia with zoospores visible. (B) tube through which zoospores are released to the environment. Phot courtesy of A. Pessier, U. Illinois

Another real value to collections is the fact that past history can be discovered through our specimens. It turns out that Bd can also be detected by swabbing alcohol preserved specimens regardless of age, although the resulting data are not quite so informative as samples from living material.  Below is Dr. Dave Blackburn’s “chytrid crew” (mostly undergrad and graduate students) swabbing specimens collected from the Impenetrable Forest of Uganda many years ago.  Dave is our new curator in herpetology and a real expert on Bd.

Dave Blackburn’s “chytrid crew”.  D. Blackburn phot.

Every trip to these small amazing islands yields new discoveries. We are planning our next expedition for 2013 and excited at the prospect of the new stuff we will find.

Here’s the parting shot.

Autonomy Day in Principe, 2012 A. Stanbridge phot, GG VI

PARTNERS

We gratefully acknowledge the support of the G. Lindsay Field Research Fund, Hagey Research Venture Fund of the California Academy of Sciences, (GG I, II), the Société de Conservation et Développement (SCD) and Africa’s Eden for logistics, ground transportation and lodging (GG III-V), STePUP of Sao Tome http://www.stepup.st/, Arlindo de Ceita Carvalho, Director General, and Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for permission to collect and export specimens for study. Special thanks for the generosity of private individuals who made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include HBD of Bom Bom and the Omali Lodge for logistics and lodging, The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abell, Prof. & Mrs. Evan C. Evans III, John and Judy Sears, John S. Livermore and Elton Welke.

Our expeditions can be supported by tax-deductable donations to “California Academy of Sciences Gulf of  Guinea Fund”.

 

 

The Race: Sixth Gulf of Guinea Expedition Redux

dashs-patch1

All of the GG VI participants are home now, and our specimens and materials are safely ensconced in their respective departments at the Academy.  For the first time, we had an official patch for the expedition. The original design of the cobra bobo and giant Begonia was drawn by one my graduate students, Dashiell Harwood. The patch was produced by our friend, Mike Murakami, who played such an important role in the production of the biodiversity coloring books (more about the education project below.) We gave many of these stick-on patches to third grade teachers to hand out as incentives to hard-working students.

tomio-1-21

Dr. Iwamoto consuming his favorite, the concon. (A. Stanbridge – GG VI

Soon after Dr. Tomio Iwamoto, our marine ichthyologist and veteran of GGI and GG II returned home to the Academy a few weeks before the last of us, he left for Africa again. And, once again, he is aboard the Norwegian research vessel, the R.V. Nansen, as a senior scientist. I devoted an entire blog to his last trip aboard the Nansen, a couple of years ago.  They are trawling for deep water fish off the coast of Guinea Conakry. I believe the ship will also be exploring the coast of Mauritania in the following weeks. Since he left before we returned we have not been able to discuss his findings during GG VI; but below is a photo of the strange pipefish he and and Dr. Brian Simison seined in northern S?o Tomé

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Microphis, the only member of its family reported from S?o Tomé and Príncipe. (B. Simison-GG VI)

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Our botanists had a “a field day,” so to speak.  Recall that Jim Shevock (right) made 682 collections during GG IV, and this time he figured he would just pick up a few things he missed.  Not so. He estimates that among the 647 collections he made in GG VI are between 50 to 100 species of bryophytes he had not seen before, and these include at least 12 genera of liverworts and 12 genera of mosses that are new to the islands.
Miko Nadel (left, above) really has his hands full trying to sort out the lichens; there are 129 previously known species, but Miko made 475 collections, many of which will undoubtedly be new.  He tells me that lichenologists classify lichens by the supporting fungus rather than the symbiotic algae.

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Pico Mesa,  Príncipe ( RCD –  GG III)

In an earlier blog from the islands, I reported that Jim, Miko and our photographer Andrew were the first CAS workersto study the top of Pico do S?o Tomé. Later on Príncipe, Jim and Miko became the first of us to reach the top of Pico Mesa (above).  Because they had to walk there rather than reaching the base by boat, they were only able to explore the northern most reaches of it; it appears to be a botanist’s paradise, and we will definitely return. Dr. Tom Daniel (GG III and IV) is particularly interested in getting up there as Miko photographed an endemic Impatiens at the top.

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Gabriel, me, Rayna Bell and Joao Pedro Pio at Bom Sucesso (A. Stanbridge – GGVI)

The herpetologists also did well. Rayna and I were assisted by a young Portuguese biologist, Joao Pedro Pio (far right), currently working on the endangered endemic maroon pigeon for workers at the University of Lisbon. He and his co-workers (including Gabriel, left) accompanied Rayna on all of her nocturnal frog hunts.

 

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Above is Hyperolius molleri, the oceanic treefrog typically inhabiting the lower elevations of both islands. This particular frog is being devoured by a wolf spider and note that it is largely a uniform green in color. In many earlier blogs, I have included images of the S?o Tomé giant treefrog which is much bigger, has bright orange and black markings and is typically found above 1100 meters.

 

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Rayna’s sample from between 700 and 900 meters would strongly suggest that the two species are hybridizing at this level.  This is pretty exciting in that, if supported by genetic analysis, it will fit right into her PhD thesis at Cornell University.

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While I failed to find adult specimens of the Príncipe shrew which we know to be endemic and distinct from the S?o Tomé shrew, we did find the largest “cobra gita” (house snake: Lamprophis sp.) we have ever seen and from a new locality.  This, too, we know to be a distinct species from the S?o Tomé Lamprophis, but we have thus far been unable to describe it. This is because there are many species of the same genus on the African mainland, and their relationships are poorly understood. So while we know the two island species are distinct from one another, we cannot guarantee that one or the other (or both) does not also occur on the mainland.

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The Príncipe thumbnail-less gecko H. principensis (Weckerphoto – GG III]

While we were on Príncipe I received word that the description our new species of gecko had been formally published, so above meet Hemidactylus principensis.  Like H. greeffi, its nearest relative on S?o Tomé, it lacks the thumbnail on the first toe, but otherwise, the two are very, very different.

Dr. Brian Simison’s finding that there are no limpets on either S?o Tomé or Príncipe is intriguing.  Brian informs me that so far as he knows, S?o Tomé and Príncipe may be the only oceanic islands that lack them.  They are present on the Cape Verde Ids, the Seychelles, etc.

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Dr Brian Simison at Laguna Azul.  (A. Stanbridge – GG VI)

This leads to the possibility that there may be something in the volcanic rock making up these islands that precludes the presence of these mollusks.

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Recall from earlier blogs that all four of the Gulf of Guinea Islands, plus Mt. Cameroon, the Cameroon highlands and even the Jos Plateau of Nigeria all originated from magmatic extrusions up through a 3,000 km-long linear fissure or rift that transects both the marine and continental parts of the African plate known as the Guinea Line; extrusion of magma occurred at various times from over 60 million years ago to the very recent Holocene continental island of Bioko.

The remarkable towers of both S?o Tomé and Príncipe which appear in these blogs with such frequency are indeed of a rather uncommon, chemically distinct rock known as phonolite, usually associated with geologic hotspots.

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Príncipe, note phonolite towers and mesa on lower left. (A. Stanbridge – GG VI)

One test of the hypothesis that it is something about the rock that is excluding limpets would be to explore the shoreline of Bioko, the youngest of the Gulf of Guinea Ids and the only continental member of the archipelago.  And as luck would have it, our colleague, Rayna Bell will be working on Bioko in a matter of months.  In addition to looking for limpets on Bioko t the presence or absences of limpets along the Gulf of Guinea coast should be documented. If indeed the rock is unsuitable for limpets Brian would predict that limpets would be found on either side of Guinea Line, but not on rocks produced by it.

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(l-r, Roberta Ayres,  Velma Schnoll, me on, S?o Tomé (A.  Stanbridge – GG VI)

I devoted an entire blog last month to the biodiversity education component of GG VI, and for all of us involved, this was just joyous. We personally delivered 1,840 endemic species coloring books to third graders in 62 classrooms of 17 selected primary schools on both islands. On the big island the schools were in the districts of S?o Tomé town, Angolares, Trindade and Neves , and on Príncipe  at Santo Antonio, Sundy, Sao Joaquim, Nova Estrella and Praia Abade.

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Porto Real, “my school” on Príncipe  (V. Schnoll – GG VI)

To say they were well received would be a gross understatement.  Again, we thank all who worked on this project (see March 9 blog: Sharing the Wealth; and for those who made GG VI financially possible, see “Partners” below).  At the adult level, we also gave five lectures on the biodiversity of the islands: two in Portugal and three at institutions on the islands themselves.

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Droo doing his thing on S?o Tomé ( R. Bell – GG VI)

Andrew Stanbridge (above), our photographer on both GG V and GG VI, is a remarkable person in many ways; much more than just a gifted professional artist.  His website is Andrewstanbridge.com

Here are some parting shots:

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PARTNERS

We gratefully acknowledge the support of the G. Lindsay Field Research Fund Hagey Research Venture Fund of the California Academy of Sciences, (GG I, II), the Société de Conservation et Développement (SCD) and Africa’s Eden for logistics, ground transportation and lodging (GG III-V), STePUP of Sao Tome http://www.stepup.st/, Arlindo de Ceita Carvalho, Director General, and Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for permission to collectexport specimens for study. Special thanks for the generosity of private individuals who have made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include HBD of Bom Bom and the Omali Lodge for logistics and lodging, The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abell, Prof. & Mrs. Evan C. Evans III, John and Judy Sears, John S. Livermore and Elton Welke. Logistics and lodging for GG VI (Omali Lodge and Bom Bom Island) were kindly provided by HBD.