Category Archives: lichens

The Race: GG VII Potpourri and the World’s Largest Reptile

Much has happened since my last post from the islands a couple of months ago which accounts for the tardiness of this one. However, Rayna Bell, our Cornell PhD candidate did manage to post two videos via National Geographic while we were on the islands.

I was invited to speak in TEDxSão Tomé, a great honor, and so returned in mid-June.  Readers should know that there is but one TAP flight to the islands per week via Lisbon so this is no small undertaking especially for a single lecture.  TEDx was a wonderful experience, and I was able to meet with some the brightest young people from the islands and to “spread the biodiversity word” internationally as well.

tedx poster

me at tedx

In the meantime, back at the Academy, we have been assessing the results of our fieldwork on GG VII; below is an image of the 2013 team, along with some of our best local friends.

Team 7

The tall Sao Tomean in the back row, and the woman on the far right are Quintino Quade and Roberta dos Santos, respectively; the gentleman in the wheelchair is Ned Seligman. All three work for an NGO called STeP UP which has interacted closely with our CAS teams since the very beginning, especially with our biodiversity education efforts.

saotome_poster small

The on-going project was recently presented and summarized at international meetings in New Orleans by Dr. Tom Daniel, our senior botanist. Courtesy Charlotte Pfeiffer, CAS.

 

Shortly after returning, I learned from two colleagues here at CAS, entomologists Dr. Paco Hita Garcia and Georg Fischer, that they had described a new ant species from Sao Tome back in 2010, but somehow forgotten to tell me! The members of GG I collected these along the trail from Bom Successo and Lagoa Amelia  over 12 years ago!

Tetramorium renae

Tetramorium renae, Photo by CAS Project Lab.

Miko Nadel, our lichenologist, has narrowed the focus of his MA dissertation to the fruticose lichens of the genus Usnea which are found at higher elevations on the islands. He ascended Pico Príncipe, and readers will recall that he was part of the team that ascended Pico do São Tomé during GG VI.  He now has over 600 collections upon which to base the first survey of this group in the islands.

Usnea  NM phot

Usnea sp. M.Nadel phot. GG VII, Principe Id.

Miko’s major advisor at San Francisco State University is Dr. Dennis Desjardin, a world authority on mushrooms and veteran of GG II and III. The blog of a year ago (April: Mountains that Glow) featured Miko’s discovery of tiny glowing mushrooms on Pico Sao Tome and later, glowing mycelium (threadlike plant body of fungi) covering steep hillsides at around 1100 meters. This year our photographer, Andrew Stanbridge, returned to Macambrara, the second locality, and discovered larger whole mushrooms that glow, not just the vegetative bodies. The two images below are of the same unidentified mushrooms in daylight and at night.

3X6A4358 AS

 

3X6A4368as

A. Stanbridge phot. GG VII, Macambrara, Sao Tome.

Rayna Bell reports from Cornell: we have very strong evidence now that the two species [São Tomé giant treefrog and Oceanic treefrog] are hybridizing [on São Tomé] (individuals of intermediate size/color and lots of molecular data to back that up), and now the question is whether they have always exchanged migrants and still diverged in body size, coloration, and breeding site (divergence with geneflow) or if they were isolated in the past and have recently come back in to contact (allopatric speciation). Just as exciting is that Rayna has discovered that the Oceanic tree frog, Hyperolius molleri (right below), that has long been thought to occur on both islands, does not; i.e., although very similar to each other morphologically, the two island populations are very different genetically, contradicting earlier molecular work by one of my interns years ago! Rayna and one of her undergraduate students just published their GG VI findings of chytrid fungus on the Sao Tome Cobra bobo; this is only the second published incidence of the fungus on a caecilian species.

Rayna 2

Rayna Bell (r), Hyperolius molleri (l). phots by A. Stanbridge, GG VII

Dr. Tamas Szuts, our Hungarian spider expert, was able to make great collections of salticids (jumping spiders) and orb weavers (Araneidae). Tamas was particularly excited about his collections of the genus Pochyta (below), a problematic group within the family.

Pochyta

Pochyta sp. Phot. T. Szuts, GG VII

Many of Tamas’s specimens are still being identified, but he writes: I also made some interesting observations about their [Pochyta] life history: a specimen had camped on a leaf just above a Phallus muchroom which attracted some small flies. [The] specimen was observed to jump several times toward the flying or landing targets, and then climbing back onto the leaf with the aid of its dragline.
Tamas took the remarkable photos below.

salti 1a

 

salti 2b

T. Szuts photos. GG VII

Finally, since we returned in May I have received several remarkable photographs of leatherback sea turtles, Dermochelys coriacea, one of four species that nest on the beaches of São Tomé and Príncipe. In terms of mass, this is the largest reptile in the world. The largest female on record was 915 kg (just under 1 ton, and close to 3 meters long (9.8 feet)!

leatherback  Sao Tome 1998
Massive female Leatherback; unknown photographer, East coast of Sao Tome, 1998, courtesy of Liv Larsson

Praia Inhame 2

Praia Inhame, São Tomé 2013; unknown photographer

 

Same turtle, Praia Inhame, São Tomé 2013; unknown photographer

There is much, much more which I will report in late September. Until then, here’s the parting shot:

P from Jockey's Bonnet

Southeast view of Príncipe Island from the Jockey’s Bonnet.  A. Stanbridge GG VII

PARTNERS:
We are most grateful to Arlindo de Ceita Carvalho, Director General, Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for their continuing authorization to collect and export specimens for study, and to Ned Seligman, Roberta dos Santos and Quintino Quade of STePUP of Sao Tomehttp://www.stepup.st/, our “home away from home”. We gratefully acknowledge the support of the G. Lindsay Field Research Fund, Hagey Research Venture Fund of the California Academy of Sciences for largely funding our initial two expeditions (GG I, II). The Société de Conservation et Développement (SCD) and Africa’s Eden provided logistics, ground transportation and lodging (GG III-V), and special thanks for the generosity of private individuals who made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include Bom Bom Island and the Omali Lodge for logistics and lodging, The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abel, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. John Sears, John S. Livermore and Elton Welke. GG VII has been funded by a very generous grant from The William K. Bowes Jr. Foundation, and substantial donations from Mrs. W.H.V.“D.A.” Brooke, Thomas B. Livermore, Rod C. M. Hall, Timothy M. Muller, Prof. and Mrs. Evan C. Evans, Mr. and Mrs. John L. Sullivan Jr., Clarence G. Donahue, Mr. and Mrs. John Sears, and a heartening number of “Coolies”, “Blackhawk Gang” returnees and members of the Academy Docent Council. Once again we are deeply grateful for the continued support of the Omali Lodge (São Tomé) and Bom Bom Island (Príncipe) for both logistics and lodging and especially for sponsoring part our education efforts for GG VII.
Our expeditions can be supported by tax-deductable donations to “California Academy of Sciences Gulf of Guinea Fund”

The Race: Endemicity and the Gulf of Guinea VII Expedition (I. The Scientists)

Readers may recall that last March, prior to GG VI, I gave several lectures in Portugal on Gulf of Guinea island biodiversity. The last was an international colloquium on São Tomé and Príncipe held at the University in Lisbon. There I met a number of the participants, among whom were old friends and a delightful entomologist named Dr. Luis Mendes; Luis and I remained in contact, and he has just published and sent me the most up-to date survey of the butterfly fauna of the islands butterfly fauna.

BUTTERFLIES

Photo by Luis Mendes

As we have learned to expect, the endemicity (uniqueness) level is high. Luis and his colleague, Bivar de Sousa, report 111 species present on both islands, 29 of which are found nowhere else in the world. Thus, fully a quarter of the butterflies (26%) are endemics. This is further testimony to the great age of these islands, as we know that genetic change (evolution) occurs with isolation and time. Last month, another paper appeared by Loureiro and Pontes confirming the endemic status of a species of dragonfly, Trithemis nigra found only on Príncipe but not seen for many years.

best Trithemis_nigra_PI_NSL_0213

Photo of Trithemis nigra byNuno Loureiro 

The image below is a summation of our current knowledge of  some of the insect endemicity on the two islands; much of the data upon which this summation is based are very old, and so much more work needs to be done.

INSECTS

photo: www images:  CAS construct.

We are getting ready for GG VII (April-May), and below is our new logo for the expedition; note that the famous Cobra bobo, a legless amphibian found only on São Tomé has been joined by an endemic Príncipe snake, also called Cobra bobo but entirely unrelated. (The cartoons of both animals were made by my graduate student, Dashiell Harwood, and the layout was by a member of our Biodiversity Education Team, Michael Murakami.

logo

GG VII (2013) logo.

Jimmy

James Shevock of CAS; photo A. Stanbridge- GG VI

Jim Shevock, a world-class bryologist, will be joining us for the third time. As you can see from the data above, he has already greatly increased our knowledge of mosses and their relatives on the islands, and there are still many species to be found. For example, during GG VI last year, Jim returned to the same locality along the Rio Papagaio in Príncipe that he had collected during GG V; in GG VI and found many plants he did not find the first time, including 10 of them new to the country! Jim has worked a lot in Asia and his nickname on Taiwan is “Little Bear.”

Rayna

Rayna Bell at Caxuiera, Sao Tome. A.  Stanbridge phot – GG VI

Rayna Bell is a graduate student from Cornell University. During GG VI she studied possible hybridization between the two endemic São Tomé treefrog species Hyperolius thomensis and H. molleri and currently has a paper in press on her work with us last year. This year we will try to find the elusive tadpole (larva) of the Príncipe giant treefrog which remains undescribed. Leptopelis palmatus is the largest treefrog in Africa.  Speaking of herpetology, to date our CAS island specimens and tissues have been used in 33 scientific publications, internationally!

Tom

Dr. Tom Daniel, Lagoa Amelia, Sao Tome.  RCD phot, GG III

Dr. Tom Daniel is a veteran of GG III and GG IV. Our senior botanist, he is a specialist on the flower family Acanthaceae (shrimp plants); in the picture above, he is standing in Lagoa Amelia next to Heteradelphia, a genus we think is endemic to São Tomé. He has done a lot of work on ferns and other Gulf of Guinea plant groups as well.

Tamas final

Dr. Tamas Szuts with some of his critters – Tszuts photos

Dr. Tamas Szuts is an expert on jumping spiders of the family Salticidae. He was a post-doctoral fellow here at the Academy under Dr. Charles Griswold (GG I) and will be joining the team for the first time. He is now on the faculty of the University of West Hungary. Salticids are about the only spider  group I think are kind of cute, face to face!

Miko

Miko Nadel, Sao Tome.  A. Stanbridge photo. GG VI

Miko Nadel is a graduate student at San Francisco State University under Prof. Dennis Desjardin (GG II, GG III). After making a comprehensive lichen collection during GG VI, he has decided to focus his research on the lichen genus Usnea; these are the hanging, pendulous lichens known in the US as “old man’s beard.”

droo better

Andrew Stanbridge at Laguna Azul, Sao Tome.  A. Stanbridge photo. GG VI

We will once again be documented by the world’s largest photographer, Andrew Stanbridge, veteran of GG V and GG VI. Andrew was one of those who ascended the Pico do São Tomé last year (see last April blog). His obvious photographic skills are only part of what he brings to our expeditions.

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Dr. Bob Drewes with Regional President of Principe, Hon. Jose Cassandra.  A. Stanbridge phot.  GG VII

I will be leading the trip as usual and will attempt to answer the ongoing question: do I have to wear a tie to see President Jose, or do I not have to wear a tie? .. Never quite seem to get it right.

The second part of the blog will be focused on the education team and our plans for Gulf of Guinea VII

Here’s the Parting Shot:

incredible Principe

Incredible Principe Island. A. Stanbridge phot. GG VI

 

PARTNERS

We are most grateful to Arlindo de Ceita Carvalho, Director General, Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for their continuing authorization to collect and export specimens for study, and to Ned Seligman, Roberta dos Santos and Quintino Quade of STePUP of Sao Tome http://www.stepup.st/, our “home away from home”.

We gratefully acknowledge the support of the G. Lindsay Field Research Fund, Hagey Research Venture Fund of the California Academy of Sciences for largely funding our initial two expeditions (GG I, II). The Société de Conservation et Développement (SCD) and Africa’s Eden provided logistics, ground transportation and lodging (GG III-V), and special thanks for the generosity of private individuals who made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include Bom Bom Island and the Omali Lodge for logistics and lodging, The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abel, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. John Sears, John S. Livermore and Elton Welke. GG VII has been funded by a very generous grant from The William K. Bowes Jr. Foundation, and substantial donations from Mrs. W.H.V.“D.A.” Brooke, Thomas B. Livermore, Rod C. M. Hall, Timothy M. Muller, Prof. and Mrs. Evan C. Evans, Mr. and Mrs. John L. Sullivan Jr., Clarence G. Donahue, Mr. and Mrs. John Sears, and a heartening number of “Coolies”, “Blackhawk Gang” returnees and members of the Academy Docent Council. Once again we are deeply grateful for the continued support of the Omali Lodge (São Tomé) and Bom Bom Island (Príncipe) for both logistics and lodging and especially for sponsoring part our education efforts for GG VII.
Our expeditions can be supported by tax-deductable donations to “California Academy of Sciences Gulf of Guinea Fund”.

 

 

 

 

 

The Race: Island Biologists in Training

Jens Vindum, Senior Collections Manager, Department of Herpetology. (phot D. Lin-GG I)

I need to add and addendum to last month’s blog, “Why We collect Specimens.” Our Senior Collections Manager, Jens Vindum (GG I, GG II) has just informed me that since 2003, there have been 33 international scientific papers published on our Gulf of Guinea reptile and amphibian specimens and/or tissue samples from them!

Clearly, the scientific world is beginning to hear about Sâo Tomé and Príncipe! At this point, I do not know how much of our material from other disciplines has been used but certainly our samples are in labs all over the world.

We have been extremely fortunate to have been able to bring a series of our graduate students with us on a number of our expeditions.  Not only have most flourished academically and many have published on their island projects, they represent a cadre of new young scientists who have an understanding of the uniqueness of the islands and the people who live on them.  All have interacted closely with local island citizens and as a result, function as young biology ambassadors for these fabulous islands.  Overall, the islands are still very poorly known to the outside world, but we are getting there!  Here are our young colleagues:


Lindsay Wilson on Bioko Island with bush viper.  RCD phot – 1998

Lindsay Wilson was a participant on our 1998 expedition to Bioko, the first island in the Gulf of Guinea chain. She completed her MSc on African treefrogs of the genus Hyperolius at San Francisco State University with highest honors.


Joel Ledford on Sao Tome.  D. Lin phot- GG I

Joel Ledford joined Gulf of Guinea I as the graduate student of Dr. Charles Griswold. He completed his MSc at San Francisco State and then his PhD in spider systematics at the University of California, Berkeley.


D. Lin phot – GG I

Also on GG I was Ricka Stoelting, my graduate student. She completed her MSC on the endemic caecilian of Sao Tome (she is holding one, above) and is currently a PhD candidate at the University of Wisconsin.  She is also working on the publication of her MSc work at San Francisco State (SFSU).


B. Van Syoc photo – GG III

Dana Carrison-Stone was a participant of the marine expedition, GG III as the graduate student of Dr. Bob Van Syoc.  Dana discovered two new species of barnacles from the islands and they are part of her MSc which she completed last year at SFSU.


D. Lin phot – GG II

Josef Uyeda was on GG II and again GG on III as an undergraduate at Willamette University and one of my Summer Systematics interns.  During his island work, he discovered and described a new species of frog from Sâo Tomé. As I write, he is defending his doctoral thesis (tomorrow!) at Oregon State University. Flash!! Josef finished his PhD today! (Oct 5)

 

                                                                                                             unknown phot.

Mac Campbell, also a Willamette undergrad, joined GG II as an assistant to our ichthyologist, Dr. Tomio Iwamoto.  He has since completed his MSc at University of Alaska, Fairbanks and is currently a PhD candidate in fish systematic at the same institution.


Weckerphoto – GG III

Rebecca Wenk joined GG III as the grad student of Dr. Tom Daniel one of our senior botanists.  Rebecca’s work resulted in her successful completion of her MSc at SFSU and also an excellent scientific publication on plants of the family Acanthaceae.  Tragically, Rebecca died of a serious illness last year.


A. Stanbridge phot – GG IV

Miko Nadel is a graduate student at San Francisco State, studying under Dr. Dennis Desjardin, the mycologist on GG II and GG III). Miko was a participant on GG VI doing the first comprehensive survey of lichens on the island.

A. Stanbridge phot. GG VI

Rayna Bell also joined us on GG VI, studying color variation in African treefrogs. Rayna is a PhD candidate at Cornell University.

The people above were or still are graduate students who have actually worked on the islands with us.  But they are not the only young academics studying our Gulf of Guinea Island material.  Here at the California Academy of Sciences we have a program known as the Summer Systematics Institute (SSI). This program is funded by the National Science Foundation, and undergraduate students can apply to work on scientific projects for the summer under the mentorship of a CAS faculty member. Here are those that have worked on Gulf of Guinea specimens. I have not included students who started as undergrad SSI interns and later became our grad students (Lindsay Wilson, Josef Uyeda and Ricka Stoelting).


unknown phot

Katie Marshall was an Occidental College undergrad and my SSI intern in 2006.  Katie studied the genetics of the Oceanic treefrog, Hyperolius molleri, the only Gulf of Guinea endemic frog that occurs on both islands.  Katie is currently a PhD candidate at the University of Washington, studying the genomics of marine bacteria.

RCD phot.

Lisette Arellano was an undergrad at the University of California, Santa Barbara when she joined us as my SSI intern in 2009. Lisette examined the morphology and genetics of cobra jita snakes (Lamprophis), long thought to be the same species on Sâo Tomé and Príncipe.  Lisette showed that in fact the two island populations are genetically quite different, also recognizable by color pattern as distinct.  Although we know each island is a different species, we have been unable to publish new names because the relationships of the same group on mainland Africa are still very unclear. Lisette is currently a PhD candidate in Biology at the University of Colorado.


RCD phot – 2010

One of the last vertebrates one would predict to be native to an oceanic island is a shrew, largely due to physiological constraints. During the SSI summer of 2010, Eden Maloney’s DNA work showed that the Sâo Tomé shrew, Crocidura thomensis, did arrive on the island naturally, probably many thousands of years ago and is a true endemic species. Its nearest relative is a different species found in eastern South Africa.  Eden has just graduated from the University of California, Los Angeles and is applying to graduate schools.  We are working on publishing her work.

unkown phot.

Lizzie Miller of the University of California, San Diego was my most recent SSI intern (2010). Lizzie has graduated and is now in graduate school at UCSD studying fish systematics.  Readers will already know from this blog that Lizzie discovered and described a new species of gecko from Príncipe, Hemidactylus principensis.

Lauren in Nigeria. D Blackburn phot – 2012.

Lauren Scheinberg is also a grad student at San Francisco State University. Although never an SSI intern nor has she been with us to the islands, she was my lab assistant on a long-term physiology project and now works as a curatorial assistant in our department.  She has become involved in a rather complicated taxonomic problem with the island skinks of the genus Afroablepharis. Like Lisette’s snakes, we know from the work of colleagues in Madeira and Portugal that the skinks are different species on Sâo Tomé and Príncipe.  Unfortunately, material we loaned them that formed part of the basis of this hypothesis was somehow lost in transit.  Lauren has analyzed our remaining material but collating the information generated by different labs can be extremely difficult.  But we are working on it.

Plans are already afoot for GG VII next year.

Here’s the parting shot:

Joy on the way to Rolas, Sao Tome.. B. Simison phot. – GG VI

PARTNERS
We gratefully acknowledge the support of the G. Lindsay Field Research Fund, Hagey Research Venture Fund of the California Academy of Sciences, (GG I, II), the Société de Conservation et Développement (SCD) and Africa’s Eden for logistics, ground transportation and lodging (GG III-V), STePUP of Sao Tome http://www.stepup.st/, Arlindo de Ceita Carvalho, Director General, and Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for permission to collect and export specimens for study. Special thanks for the generosity of private individuals who made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include HBD of Bom Bom and the Omali Lodge for logistics and lodging, The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abell, Prof. & Mrs. Evan C. Evans III, John and Judy Sears, John S. Livermore and Elton Welke.
Our expeditions can be supported by tax-deductable donations to  “California Academy of Sciences Gulf of Guinea Fund”

The Race: Sixth Gulf of Guinea Expedition Redux

dashs-patch1

All of the GG VI participants are home now, and our specimens and materials are safely ensconced in their respective departments at the Academy.  For the first time, we had an official patch for the expedition. The original design of the cobra bobo and giant Begonia was drawn by one my graduate students, Dashiell Harwood. The patch was produced by our friend, Mike Murakami, who played such an important role in the production of the biodiversity coloring books (more about the education project below.) We gave many of these stick-on patches to third grade teachers to hand out as incentives to hard-working students.

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Dr. Iwamoto consuming his favorite, the concon. (A. Stanbridge – GG VI

Soon after Dr. Tomio Iwamoto, our marine ichthyologist and veteran of GGI and GG II returned home to the Academy a few weeks before the last of us, he left for Africa again. And, once again, he is aboard the Norwegian research vessel, the R.V. Nansen, as a senior scientist. I devoted an entire blog to his last trip aboard the Nansen, a couple of years ago.  They are trawling for deep water fish off the coast of Guinea Conakry. I believe the ship will also be exploring the coast of Mauritania in the following weeks. Since he left before we returned we have not been able to discuss his findings during GG VI; but below is a photo of the strange pipefish he and and Dr. Brian Simison seined in northern S?o Tomé

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Microphis, the only member of its family reported from S?o Tomé and Príncipe. (B. Simison-GG VI)

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Our botanists had a “a field day,” so to speak.  Recall that Jim Shevock (right) made 682 collections during GG IV, and this time he figured he would just pick up a few things he missed.  Not so. He estimates that among the 647 collections he made in GG VI are between 50 to 100 species of bryophytes he had not seen before, and these include at least 12 genera of liverworts and 12 genera of mosses that are new to the islands.
Miko Nadel (left, above) really has his hands full trying to sort out the lichens; there are 129 previously known species, but Miko made 475 collections, many of which will undoubtedly be new.  He tells me that lichenologists classify lichens by the supporting fungus rather than the symbiotic algae.

as-mesa

Pico Mesa,  Príncipe ( RCD –  GG III)

In an earlier blog from the islands, I reported that Jim, Miko and our photographer Andrew were the first CAS workersto study the top of Pico do S?o Tomé. Later on Príncipe, Jim and Miko became the first of us to reach the top of Pico Mesa (above).  Because they had to walk there rather than reaching the base by boat, they were only able to explore the northern most reaches of it; it appears to be a botanist’s paradise, and we will definitely return. Dr. Tom Daniel (GG III and IV) is particularly interested in getting up there as Miko photographed an endemic Impatiens at the top.

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Gabriel, me, Rayna Bell and Joao Pedro Pio at Bom Sucesso (A. Stanbridge – GGVI)

The herpetologists also did well. Rayna and I were assisted by a young Portuguese biologist, Joao Pedro Pio (far right), currently working on the endangered endemic maroon pigeon for workers at the University of Lisbon. He and his co-workers (including Gabriel, left) accompanied Rayna on all of her nocturnal frog hunts.

 

critter-1
Above is Hyperolius molleri, the oceanic treefrog typically inhabiting the lower elevations of both islands. This particular frog is being devoured by a wolf spider and note that it is largely a uniform green in color. In many earlier blogs, I have included images of the S?o Tomé giant treefrog which is much bigger, has bright orange and black markings and is typically found above 1100 meters.

 

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Rayna’s sample from between 700 and 900 meters would strongly suggest that the two species are hybridizing at this level.  This is pretty exciting in that, if supported by genetic analysis, it will fit right into her PhD thesis at Cornell University.

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While I failed to find adult specimens of the Príncipe shrew which we know to be endemic and distinct from the S?o Tomé shrew, we did find the largest “cobra gita” (house snake: Lamprophis sp.) we have ever seen and from a new locality.  This, too, we know to be a distinct species from the S?o Tomé Lamprophis, but we have thus far been unable to describe it. This is because there are many species of the same genus on the African mainland, and their relationships are poorly understood. So while we know the two island species are distinct from one another, we cannot guarantee that one or the other (or both) does not also occur on the mainland.

h-principensis
The Príncipe thumbnail-less gecko H. principensis (Weckerphoto – GG III]

While we were on Príncipe I received word that the description our new species of gecko had been formally published, so above meet Hemidactylus principensis.  Like H. greeffi, its nearest relative on S?o Tomé, it lacks the thumbnail on the first toe, but otherwise, the two are very, very different.

Dr. Brian Simison’s finding that there are no limpets on either S?o Tomé or Príncipe is intriguing.  Brian informs me that so far as he knows, S?o Tomé and Príncipe may be the only oceanic islands that lack them.  They are present on the Cape Verde Ids, the Seychelles, etc.

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Dr Brian Simison at Laguna Azul.  (A. Stanbridge – GG VI)

This leads to the possibility that there may be something in the volcanic rock making up these islands that precludes the presence of these mollusks.

guinea-line
Recall from earlier blogs that all four of the Gulf of Guinea Islands, plus Mt. Cameroon, the Cameroon highlands and even the Jos Plateau of Nigeria all originated from magmatic extrusions up through a 3,000 km-long linear fissure or rift that transects both the marine and continental parts of the African plate known as the Guinea Line; extrusion of magma occurred at various times from over 60 million years ago to the very recent Holocene continental island of Bioko.

The remarkable towers of both S?o Tomé and Príncipe which appear in these blogs with such frequency are indeed of a rather uncommon, chemically distinct rock known as phonolite, usually associated with geologic hotspots.

phonolye-and-mesa
Príncipe, note phonolite towers and mesa on lower left. (A. Stanbridge – GG VI)

One test of the hypothesis that it is something about the rock that is excluding limpets would be to explore the shoreline of Bioko, the youngest of the Gulf of Guinea Ids and the only continental member of the archipelago.  And as luck would have it, our colleague, Rayna Bell will be working on Bioko in a matter of months.  In addition to looking for limpets on Bioko t the presence or absences of limpets along the Gulf of Guinea coast should be documented. If indeed the rock is unsuitable for limpets Brian would predict that limpets would be found on either side of Guinea Line, but not on rocks produced by it.

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(l-r, Roberta Ayres,  Velma Schnoll, me on, S?o Tomé (A.  Stanbridge – GG VI)

I devoted an entire blog last month to the biodiversity education component of GG VI, and for all of us involved, this was just joyous. We personally delivered 1,840 endemic species coloring books to third graders in 62 classrooms of 17 selected primary schools on both islands. On the big island the schools were in the districts of S?o Tomé town, Angolares, Trindade and Neves , and on Príncipe  at Santo Antonio, Sundy, Sao Joaquim, Nova Estrella and Praia Abade.

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Porto Real, “my school” on Príncipe  (V. Schnoll – GG VI)

To say they were well received would be a gross understatement.  Again, we thank all who worked on this project (see March 9 blog: Sharing the Wealth; and for those who made GG VI financially possible, see “Partners” below).  At the adult level, we also gave five lectures on the biodiversity of the islands: two in Portugal and three at institutions on the islands themselves.

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Droo doing his thing on S?o Tomé ( R. Bell – GG VI)

Andrew Stanbridge (above), our photographer on both GG V and GG VI, is a remarkable person in many ways; much more than just a gifted professional artist.  His website is Andrewstanbridge.com

Here are some parting shots:

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PARTNERS

We gratefully acknowledge the support of the G. Lindsay Field Research Fund Hagey Research Venture Fund of the California Academy of Sciences, (GG I, II), the Société de Conservation et Développement (SCD) and Africa’s Eden for logistics, ground transportation and lodging (GG III-V), STePUP of Sao Tome http://www.stepup.st/, Arlindo de Ceita Carvalho, Director General, and Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for permission to collectexport specimens for study. Special thanks for the generosity of private individuals who have made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include HBD of Bom Bom and the Omali Lodge for logistics and lodging, The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abell, Prof. & Mrs. Evan C. Evans III, John and Judy Sears, John S. Livermore and Elton Welke. Logistics and lodging for GG VI (Omali Lodge and Bom Bom Island) were kindly provided by HBD.

The Race: Mountains That Glow

 

Drs. Brian Simison and Tomio Iwamoto and Roberta Ayres and Rayna Bell left early this morning on the TAP flight for home; five of us remain: our two botanists on Principe and three of us here on Sao Tome continue. It is time for a science update, especially since it is pouring rain as I write, and our biodiversity education mission on the big island is completed for now.

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Last week, and for the first time, Academy scientists collected the top of Pico do Sao Tome. At over 2,000 meters, the peak is remote and can be quite dangerous to ascend in the rainy season, especially carrying equipment. Our guys were able to accomplish this with help from our friends, Andre Reis, Hugo Serodio and Antonio Fernandes. Andre runs Tropic Ventures, a new company that provides various tourist activities including car rentals, water sports, etc but they also take on really hairy missions into the interior of the island. Andre is ex-military (Portuguese) and his company, equipment and skills are very, very good.

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After a postponement due to the rains, Jim Shevock, Miko Nadel, and our photographer Andrew Stanbridge made two-day ascent, collecting all the way.

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Those who know Jim Shevock, the Academy’s moss expert, will not be surprised to learn that he went nuts. I have no idea how many moss specimens he got nor how many are new, but to say he was enthusiastic upon their return would be a gross understatement.

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But the neatest discovery was made by Miko Nadel, our lichen grad student from San Francisco State. Sitting and eating dinner in the darkness, Miko looked down and thought he saw Andrew’s wristwatch on the ground, glowing at his feet. What he soon discovered was not Andrew’s watch but a patch of bioluminescent mushrooms!

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Miko’s graduate advisor, Dr. Dennis Desjardin, a world authority on mushrooms, was with us on GG II and GG III and made the first comprehensive survey of both islands. But , curiously, Dennis (a Fellow of CAS) has recently been doing cutting edge research on bioluminescent mushrooms! So I waited until Dennis gave his OK, before posting Andrew’s images of these remarkable fungi. As usual, we will not know what all this means until we return to CAS for analysis. That is how science works.

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Rayna Bell’s mission was to examine the possible hybridization between the Sao Tome giant treefrog, Hyperolius thomensis and the oceanic treefrog, H. molleri. We have had genetic and phenotypic hints that this might be happening for some time now. Rayna’s PhD thesis at Cornell is on the evolution of sexual dichromatism in African treefrog species.

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It looks as though hybridization is indeed going on between the two species at about 800 to 900 meters. Rayna was able to get samples of the giant frog at 1400 meters and then sampled “downhill” at various elevations to nearly sea level, in oceanic treefrog territory. We had great help from Joao Pedro Pio, a young Portuguese friend who is working on the endemic maroon pigeon; lucky for us, he loves adventure and frogs. Rayna is tireless, bright and fun to be with; but among us bush herpetologists, the real test is how one does in the boonies. She is wonderful; I was proud to have her along with us.

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And by the way, last night (Rayna’s last), she and Andrew visited the “magic tree” where we have always found the giant treefrog.. they came in about midnight, and told me that as they sat next to the tree, waiting for frogs, the entire forest floor around them was aglow!

It is still raining and outside my door, a Sao Tome prinia is hopping around in the bushes; I will let Andrew’s pictures speak of Tomio Iwamoto and Brian’s adventures in Micoló catching mudskippers and pipefish.

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The Parting Shot:

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all photos by Andrew Stanbridge

PARTNERS

We gratefully acknowledge the support of the G. Lindsay Field Research Fund Hagey Research Venture Fund of the California Academy of Sciences, (GG I, II), the Société de Conservation et Développement (SCD) and Africa’s Eden for logistics, ground transportation and lodging (GG III-V), STePUP of Sao Tome http://www.stepup.st/, Arlindo de Ceita Carvalho, Director General, and Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for permission to collectexport specimens for study. Special thanks for the generosity of private individuals who have made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abell,John and Judy Sears, John S. Livermore and Elton Welke. Logistics and lodging for GG VI (Omali Lodge and Bom Bom Island) were kindly provided by HBD.

Our expeditions can be supported by tax-free donations to “California Academy of Sciences Gulf of Guinea Fund”.

The Race: Gulf of Guinea VI. First week.

Having completed my lectures at CIBIO near Porto, and in the symposium on Sao Tome and Principe in Lisbon, I hooked up with Drs Tomio Iwamoto, Brian Simison, and James Shevock, Miko Nadel and our outstanding photographer, Andrew Stanbridge in the Lisbon airport whereupon we paid gobs of money in overweight charges to TAP airlines (coloring books). The first six of us arrived at the Omali and have been working in various sites for a week until we were joined by Rayna Bell on the Friday morning flight. Rayna is the Cornell grad student who is looking at some interesting genetic problems with the treefrogs here. Early on I paid visits to Arlindo Carvalho, Director General of the Ministry of the Environment and Victor Bonfim, Director of Conservation to pay our respects and request our authorizations.

All of the photos below are by Andrew Stanbridge.

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The first six of us; lunch at Angolares, southeast Sao Tome

So far, we have found no limpets! Small barnacles, yes; marine mollusks, yes; but no true limpets. Brian is pretty much sampling everythingbut his specialty critters do not seem to be here.Whether or not there is some chemical feature of the volcanic rock that renders the rocks uninhabitable remains a question.Perhaps Principe willbe different.

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Brian Simison (right) searching rocks on Sao Tome west coast.

Jim Shevock has already found two bryophyte families new to the islands, both on the Macambrara road at about 1100 meters. This is Jim’s second trip; in GG IV, he made some 800 collections, so this is stuff we missed.

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Jim reaching for hanging bryophytes on the Rio Abade

Miko Nadel, our grad student from San Francisco State, is conducting what we think is the first lichen survey ever of these oceanic islands- so everything is kind of new.

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Miko with captured lichen; on the road to Sao Nicolau.

Tomio Iwamoto, veteran of GG I and II is working closely with the Department of Fisheries and an NGO called MARAPA to produce a guide primarily for the local fishermen.

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Tomio inspects catches near Agua Ize

Yesterday, after Rayna’s arrival, we went up to inspect the large Olea tree which is our one locality for the unique Hyperolius thomensis. Like last year, we found no adults but there were old egg masses in both tree holes, and definitely tadpoles in one of them. The rains are upon us, and we are hoping that during the next couple of weeks the other smaller green species will appear. We are being assisted by old friends and a new one, a young Portuguese graduate named Joao Pedro Pio who works with Mariana Carvalho on the endemic maroon pigeon. I think Rayna and I, Pedro and a local guy from Nova Moca will go up at night to Lagoa Amelia (nearly 1500 meters) to try to collect Hyperolius molleri.

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Andrew Stanbridge continues to take brilliant pictures. He is much more of an asset to us than just his fabulous shots.

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Andrew with Bode, famed resident of the remote Bombaim. Bode sings the Portuguese national anthem in a truly appalling voice and sells cobra skins. (photo: Brian Simison)

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Me, bargaining for a side-necked turtle (Pelusios castaneus) at Ribeira Afonso

Tuesday, the two botanists and Andrew will go up to the top of the Pico, an area we have never collected. We are being taken there by our friends from Tropic Ventures, Andre, Hugo and Maneh. At the same time, Rayna and I will go out to Rolas Island to look for caecilians.They were collected on the island many years ago and we wish to add them to our genetic map of this unique species.

Here’s the parting shot.

parting-shotImagine thousands of hectares of oil palm between this boy and Cao Grande. It is happening.

PARTNERS

We gratefully acknowledge the support of the G. Lindsay Field Research Fund Hagey Research Venture Fund of the California Academy of Sciences, (GG I, II), the Société de Conservation et Développement (SCD) and Africa’s Eden for logistics, ground transportation and lodging (GG III-V), STePUP of Sao Tome http://www.stepup.st/, Arlindo de Ceita Carvalho, Director General, and Victor Bomfim, and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for permission to collectexport specimens for study. Special thanks for the generosity of private individuals who have made the GG III-V expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, and Sheila Farr Nielsen; GG VI supporters include The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Bernard S. Schulte, Corinne W. Abell, John and Judy Sears, John S. Livermore and Elton Welke. Logistics and lodging for GG VI (Omali Lodge and Bom Bom Island) were kindly provided by HBD.

Our expeditions can be supported by tax-free donations to “California Academy of Sciences Gulf of Guinea Fund”.

The Race: GG VI, Part I (the Science)

Things have been very busy here at the Academy of Sciences, and this is one of my tardier blogs! However, part of the hustle and bustle has been in planning our next expedition, Gulf of Guinea VI.

The first good news is that our new species of gecko from Príncipe is about to be formally published in the African Journal of Herpetology, possibly as soon as April. It is bad luck to give you its name before it is published, but here is what it looks like, and we are adding yet another endemic species to our wonderful islands!

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Our new gecko near Bom Bom, Principe.  Weckerphoto- GG IV

As readers know, our expeditions have largely been privately funded since GG III, and the friends who have helped us are always celebrated in the PARTNERS section below.  However, I am going to take this early opportunity to thank the folks who are making the upcoming expedition financially possible: The Herbst Foundation, The “Blackhawk Gang,” the Docent Council of the California Academy of Sciences in honor of Kathleen Lilienthal, Prof. & Mrs. Evan C. Evans III, Bernard S. Schulte, John S. Livermore, John and Judy Sears and Elton Welke.

Here are the scientist participants in the upcoming GG VI which will run from 30 March until 5 May.

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Dr. Tomio Iwamoto on Sao Tome.  D Lin phot- GGI

Dr. Tomio Iwamoto is Curator Emeritus of our Ichthyology Department, and my good friend and flyfishing buddy.  He is a veteran of GG I and GG II and has already published two scientific papers as a result of these expeditions. He has also worked with São Tomé and Príncipe fisheries people in deepwater trawling around the islands (see Shipboard Discoveries….June 2010 blog).  During GG VI he wants to visit as many local fishing villages as he can on both islands to see what the most commonly caught fishes are.  His goal is to produce a popular guide for the fishermen themselves! This will not be a scientific publication.

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A Longfin crevalle jack described to science only five years ago. Sao Tome.  A. Stanbridge phot- GG V

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Dr. Brian Simison; limpet photo by  T. Laupstad]

Dr. Brian Simison is a world authority on small monovalved molluscs known as limpets, commonly found firmly attached to rocks in the coastal littoral zones.  So far as we know, this group has never before been sampled in São Tomé and Príncipe, and our expectations for new discoveries are high.

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Crocidura tomensis, the Sao Tome shrew. Phot by Ricardo Lima, 2010

Brian is alsoDirector of the Academy’s  Center for Comparative Genomics which is where all our genetic and molecular work is done.  He became involved in our molecular test of the true status of the endemic São Tomé shrew (see Unique shrew…. August 2010 blog).  Working with Eden Maloney, he discovered that the shrew on Príncipe, long thought to be a mainland species, may indeed also be an endemic to that island.  While we collected DNA of this second shrew during GG II, we collected no adults.  Assuming we receive permission from the Ministry, Brian and I will also try to secure a couple of adult Príncipe shrews. If this is indeed a unique species, we will need to be able do describe its anatomy formally.

Two graduate students will be joining us.  The first is Rayna Bell who is doing her PhD on African tree frogs at Cornell University.

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Oceanic tree frog, Hyperolius thomensis (phot RCD- GG I); Rayna Bell

Rayna will be looking at a potential hybrid zone between the oceanic tree frog (above, Hyperolius molleri) and the flambouyant São Tomé giant tree frog, H. thomensis of higher elevations, which I have featured in many of these blogs.  There is something curious going on with the genetics of these species and one of Rayna’s projects will be to look at both populations from the molecular perspective.

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Miko Nadel and lichens (from web)

Our other graduate student is Miko Nadel, who is doing his MSc in botany at San Francisco State University under the guidance of our favorite mycologist, Dr. Dennis Desjardin, describer of the now infamous Phallus drewesi of São Tomé.  Recall that Drs. Desjardin (GG II & III) and Perry (GG III) learned that over 33% of the mushrooms of São Tomé and Príncipe are new to science.  Miko informs me that there have been only a couple of scientific papers ever written on the lichens of the islands, and that was back in the 1880’s.  So it is time for a more modern and thorough look at this flora.

Finally, we round the scientist group out with the irrepressible Dr. James Shevock, the Academy’s bryophyte (mosses and their allies) expert.

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Jim Shevock with moss at the Omali.  RCD phot-GG IV

The results of Jim’s efforts during GG IV are summarized in the image below.  The largest uptick of new species for the islands is expected in the third paper, which we hope will be published this year.

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Compilation and photo by RCD, GG IV

As in GG V, the new expedition will be accompanied by the world’s largest photographer, Andrew Stanbridge.  His images from GG V are magnificent, and he is a most excellent and willing field companion. His work can be viewed on the web at www.andrewstanbridge.com


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RCD and photographer Andrew Stanbridge. V. Schnoll phot – GG V

There will be two additional members of GG VI, both veterans of earlier expeditions,  Ms Velma Schnoll and Ms Roberta Ayres, but I will reintroduce  them in more detail in the second part of this blog which will be on our concurrent biodiversity education activities.

The parting shot:

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The Jockey’s bonnet, Principe. Photo by Eddie Herbst – 2011

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PARTNERS

We gratefully acknowledge the support of the G. Lindsay Field Research Fund Hagey Research Venture Fund of the California Academy of Sciences, (GG I, II), the Société de Conservation et Développement (SCD) and Africa’s Eden for logistics, ground transportation and lodging (GG III-V), STePUP of Sao Tome http://www.stepup.st/, Arlindo de Ceita Carvalho, Director General, and Victor Bomfim,  and Salvador Sousa Pontes of the Ministry of Environment, Republic of São Tomé and Príncipe for permission to export specimens for study.  Special thanks for the generosity of private individuals who have made the GG III-V  expeditions possible: George G. Breed, Gerry F. Ohrstrom, Timothy M. Muller, Mrs. W. H. V. Brooke, Mr. and Mrs. Michael Murakami, Hon. Richard C. Livermore, Prof. & Mrs. Evan C. Evans III, Mr. and Mrs. Robert M. Taylor, Velma and Michael Schnoll, Sheila Farr Nielsen, Corinne W. Abel and Mr. and Mrs. John Sears, Bernard Schulte, and John S. Livemore.   Our expeditions can be supported by tax-free donations to “California Academy of Sciences Gulf of Guinea Fund”.